Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911817.1_cds_XP_016461819.1_55104
CDS Infomation

[gene=LOC107785107] [db_xref=GeneID:107785107] [protein=SRSF protein kinase 1-like] [protein_id=XP_016461819.1] [location=complement(join(16023..16343,16437..16484,16784..17572,19774..19962))] [gbkey=CDS]
Sequence

ATGTCATGTTCACCGTCGTCATCGTCGGCATCGGAAGATGAAGATGAAGGAATGGATTCA
TACAGAAAAGGAGGATATCATGCCGTGAGAATCGGCGATTCATTCTCCGGCGGCCGATAT
ATCGCTCAGCGAAAACTCGGCTGGGGTGAATTCTCCACCGTTTGGCTCGCTTACGATACG
CGATCGTCCGGATTTGTAGCCTTGAAGATCCAGAAAAGTGCGCCACAATTTGCTCAAGCT
GCTCTTCACGAAATTGAAATCCTTTCTGCTATTGCCGACGGTGATCCCTCTAATAGTAAA
TATGTTGTTAGACTTATTGACCATTTTAAGCATACAGGTCCAAATGGACAGCATTTATGC
ATGGTCCTTGAATTTCTTGGTGACAGCTTATTGCACCTCGTCAAATATAATCGTTATAAA
GGCCTTGAACTGAACAGAGTTAGGGAAATATGCCAGTGCATTCTAACTGGTCTAGATTAT
TTGCACAGGGAACTTGGACTTATTCATACAGATCTAAAACTTGAAAATGTTCTTTTACTT
TCCACGATTAATACCACAAAGGATCCAATTAGATCGGGAATGGCGCCGATACTTGAAAGG
CCTGAAGGGATCCCAAATGGAGGAGCAACAATGAATATTATTGAGAAAAAGCTAAAACAA
AGGGCAAGGAGGGCAGCAGCCAGGATATCTAATAGACGAGCTTCAATGGGTGGGGTGGGC
GGAGTTGCGAAAGCAAATAGAAGTCTTGATGGAATTGACATAAGGTGCAAAGTTGTGGAT
TTTGGAAATGCATGCTGGGCTGACAAGCAGTTTGCACAAGAAATTCAAACACGGCAGTAT
AGAGCTCCAGAAGTTATACTTCAGTCTGGATATTCATTCTCTGCTGACATGTGGTCTTTT
GCTTGTATTGTATTTGAGCTTGCTACTGGGGAGATGATGTTCACACCCAAAGGTGGACAA
GGTTTCAGTGAAGATGAGGATCACCTTGCTATGATGATGGAGCTTCTAGGAAAGATGCCC
CGGAAGATAGCCAATGGTGGGGCTCGCTCTAAAGATTACTTTGACAAATATGGAGATTTG
AAGAGGATCCGGAGGCTGAAGCACGGGTCTTTAGAAAAGTTACTTATTGACAAATTTCGA
TTTTATGAAATTGATGCCCATGAATTTGCCAAATTTCTTTGTCCCCTTCTTGATTTTGAG
CCAGAGAATCGACCAACGGCTCACCAGTGCTTGCAACACCCATGGCTCAACGTTAAAAGT
CTAAACCAAACAGAGGTGAAGAGTGAATCTGGTGTGGAAACGGTCAATGTCGGGATGAGA
AACCTACATATGAAGGGCGGTAAGTGA

Peptide Sequence

PEP ID

XP_016461819.1
PEP Infomation

PREDICTED: SRSF protein kinase 1-like [Nicotiana tabacum]
Sequence

MSCSPSSSSASEDEDEGMDSYRKGGYHAVRIGDSFSGGRYIAQRKLGWGEFSTVWLAYDT
RSSGFVALKIQKSAPQFAQAALHEIEILSAIADGDPSNSKYVVRLIDHFKHTGPNGQHLC
MVLEFLGDSLLHLVKYNRYKGLELNRVREICQCILTGLDYLHRELGLIHTDLKLENVLLL
STINTTKDPIRSGMAPILERPEGIPNGGATMNIIEKKLKQRARRAAARISNRRASMGGVG
GVAKANRSLDGIDIRCKVVDFGNACWADKQFAQEIQTRQYRAPEVILQSGYSFSADMWSF
ACIVFELATGEMMFTPKGGQGFSEDEDHLAMMMELLGKMPRKIANGGARSKDYFDKYGDL
KRIRRLKHGSLEKLLIDKFRFYEIDAHEFAKFLCPLLDFEPENRPTAHQCLQHPWLNVKS
LNQTEVKSESGVETVNVGMRNLHMKGGK

Transcript Sequence

Gene sequence data has not been registered.